PUBLICATIONS

See Lewis core lab publications here

Papers published by CMRF users, using CMRF resources:

2024

Ayelen M. Blanco, Femilarani Antomagesh, Sara Comesana, Jose L. Soengas, Mathilakath M. Vijayan. 2024. Chronic cortisol stimulation enhances hypothalamus-specific enrichment of metabolites in the rainbow trout brain. American Journal of Physiology Endocrinology and Metabolism 326(3):E382-397. doi:10.1152/ajpendo.00410.2023 

Marcel van de Wouw, Yanan Wang, Matthew L. Workentine, Elnaz Vaghef-Mehrabani, Delaney Barth, Emily M. Mercer, Deborah Dewey, Marie-Claire Arrieta, Raylene A. Reimer, Lianne Tomfohr-Madsen, and Gerald F. Giesbrecht. 2024. Cluster-specific association between the gut microbiota and behavioral outcomes in preschool-aged children. Microbiome 12:60. doi:10.1186/s40168-024-01773-5

Rafel Fortuna, Weilan Wang, Shyamchand Mayengbam, Erin W. Noye Tuplin, Kara Sampsell, Keith A. Sharkey, David A. Hart, and Raylene A. Reimer. 2024. Effect of prebiotic fiber on physical function and gut microbiota in adults, mostly women, with knee osteoarthritis and obesity: a randomized controlled trial. European Journal of Nutrition doi:10.1007/s00394-024-03415-w

Cedoljub Bundalovic-Torma, Gang Wang, Sharanya Menon, Sabina Bruehlmann, Lynn Wilsack, Renata Rehak, Sahar Bagheri, Mohammad Banoei, Lawrence Lou, Yasmin Nasser, Matthew Woo, Ian Lewis, Kathy McCoy, Christopher N Andrews. 2024. Targeted and reproducable sampling of the small intestine microbiome with the small intestine microbiome aspirate capsule technology (SIMBA): Clinical validation against endoscopy aspirates and fecal samples in healthy and GI disorder. Gastroenterology 166(5):S-208.

Luis F Ponce, Stephanie L Bishop, Soren Wacker, Ryan A Groves, Ian A Lewis. 2024. SCALiR: A web application for automating absolute quantification of mass spectrometry-based metabolomics data. Analytical Chemistry 96(17):6566-6574. doi:10.1021/acs.analchem.3c04988

Ayush Mandwal, Stephanie L Bishop, Mildred Castellanos, Anika Westlund, George Chaconas, Jörn Davidsen, Ian A Lewis. 2024. MINNO: An open source software for refining metabolic networks and investigating complex netwoek activity using empirical metabolomics data. Analytical Chemistry 96(8):3382-3388. doi: 10.1021/acs.analchem.3c04501

2023

Regula Burkhard, Mia Koegler, Kirsty Brown, Kirsten Wilson, Lukas F. Mager, Amanda Z. Zucoloto, Carolyn Thomson, Nanjundappa Roopa Hebbandi, Isla Skalosky, Shokouh Ahmadi, Braedon McDonald, Markus B. Geuking. 2023. Intestinal colonization regulates systemic anti-commensal immune sensitivity and hyperreactivity. Frontiers in Immunology https://doi.org/10.3389/fimmu.2023.1030395

Marcel van de Wouw, Laura Rojas, Elnaz Vaghef-Mehrabani, Yanan Wang, Chloe Fichter, Matthew L. Workentine, Deborah Dewey, Marie-Claire Arrieta, Raylene A. Reimer, Lianne Tomfohr-Madsen, Gerald F. Giesbrecht. 2023. Exploring associations between the gut microbiota and full-scale intelligence in preschool children. Neuroscience Letters https://doi.org/10.1016/j.neulet.2023.137357

Ali Pormohammad, Andrea Firrinciel, Daniel A. Salazar-Alemán, Mehdi Mohammadi, Dave Hansen, Martina Cappelletti, Davide Zannoni, Mohammad Zarei, Raymond J. Turner. 2023. Insights into the Synergistic Antibacterial Activity of Silver Nitrate with Potassium Tellurite against Pseudomonas aeruginosa. Antimicrobial Chemotherapy. https://doi.org/10.1128/spectrum.00628-23

Tosca A. van Gelderen, Claudia Ladisa, Marcela Salazar-Moscoso, Carla Folgado, Hamid R. Habibi, Laia Ribas. 2023. Metabolomic and transcriptomic profiles after immune stimulation in the zebrafish testes. Genomics. https://doi.org/10.1016/j.ygeno.2023.110581

Maria J Arzamendi, Adam Shute, Ronald Chan, Manon Defaye, Dominique G Bihan, Ian Lewis, Christophe Altier, Keith A Sharkey, Markus B Geuking, Yasmin Nasser. 2023. Sex-specific gut microbiota differences in post-inflammatory visceral pain. Gastroenterology 164(6):S-9.

Samira A. Hamed, Armaan Mohan, Saranya Navaneetha Krishnan, Arthur Wang, Marija Drikic, Nicole L. Prince, Ian Lewis, Jane Shearer, Åsa V. Keita, Johan D. Söderholm, Timothy E. Shutt, and Derek M. McKay. Butyrate reduces adherent-invasive E. coli-evoked disruption of epithelial mitochondrial morphology and barrier function: involvement of free fatty acid receptor 3. 2023. Gut Microbes.

Kirsty Brown, Carolyn A Thomson, Soren Wacker, Marija Drikic, Ryan Groves*, Vina Fan, Ian A. Lewis, Kathy D. McCoy. Microbiota alters the metabolome in an age- and sex- dependent manner in mice. Nature Communications (2023) 14(1):1348. doi: 10.1038/s41467-023-37055-1. PMID: 36906623

Kira L. Tomlinson, Sebastián A. Riquelme, Swikrity Upadhyay Baskota, Marija Drikic*, Ian R. Monk, Timothy P. Stinear, Ian A. Lewis, Alice S. Prince. Staphylococcus aureus stimulates neutrophil itaconate production that suppresses the oxidative burst. Cell Reports (2023) 42(2):112064. https://doi.org/10.1016/j.celrep.2023.112064

2022

Rosica Valcheva, Heather Armstrong, Ognjen Kovic, Michael Bording-Jorgensen, Simona Veniamin, María Elisa Pérez-Muñoz, Natasha Haskey, Melissa Silva, Farhad Peerani, Karen Wong, Dina H. Kao, Sander Veldhuyzen Van Zanten, Karen I. Kroeker, Deanna L. Gibson, Eytan Wine, Michael Gänzle, Jens Walter, Levinus A. Dieleman. 2022. Double blind placebo-controlled trial for the prevention of ulcerative colitis relapses by β-fructan prebiotics: efficacy and metabolomic analysis. MedRxiv https://doi.org/10.1101/2022.01.16.22269376

Yanan Wang, Marcel van de Wouw, Lauren Drogos, Elnaz Vaghef-Mehrabani, Raylene A Reimer, Lianne Tomfohr-Madsen, Gerald F Giesbrecht. 2022. Sleep and the gut microbiota in preschool aged children. Sleep: zsac020. https://doi.org/10.1093/sleep/zsac020

Christian Giommi, Claudia Ladisa, Oliana Carnevali, Francesca Maradonna, Hamid R Habibi. 2022. Metabolomic and Transcript Analysis Revealed a Sex-Specific Effect of Glyphosate in Zebrafish Liver. Int J Mol Sci https://doi.org/10.3390/ijms23052724

Moonhyuk Kwon, Joseph C. Utomo, Keunwan Park, Cameron A. Pascoe, Sorina Chiorean, Iris Ngo, Kyle A. Pelot, Cheol-Ho Pan, Seon-Won Kim, Philipp Zerbe, John C. Vederas, and Dae-Kyun Ro. 2022. Cytochrome P450-Catalyzed Biosynthesis of a Dihydrofuran Neoclerodane in Magic Mint (Salvia divinorum). ACS Catal. https://doi.org/10.1021/acscatal.1c03691 

Jumana Samara, Shirin Moossavi, Belal Alshaikh, Van A. Ortega, Veronika Kuchařová Pettersen, Tahsin Ferdous, Suzie L. Hoops, Amuchou Soraisham, Joseph Vayalumkal, Deonne Dersch-Mills, Jeffrey S. Gerber, Sagori Mukhopadhyay, Karen Puopolo, Thomas A. Tompkins, Dan Knights, Jens Walter, Harish Amin, Marie-Claire Arrieta. 2022. Supplementation with a probiotic mixture accelerates gut microbiome maturation and reduces intestinal inflammation in extremely preterm infants. Cell Host & Microbe 30(5): P696-711. https://doi.org/10.1016/j.chom.2022.04.005 

Claudia Ladisa, Yifei Ma, Hamid R. Habibi. 2022. Metabolic Changes During Growth and Reproductive Phases in the Liver of Female Goldfish (Carassius auratus). Front Cell Dev Biol https://doi.org/10.3389/fcell.2022.834688 

Luiz Gustavo N. de Almeida, Daniel Young , Lorraine Chow, Joshua Nicholas, Adrienne Lee, Man-Chiu Poon, Antoine Dufour, Ejaife O. Agbani. 2022. Proteomics and Metabolomics Profiling of Platelets and Plasma Mediators of Thrombo-Inflammation in Gestational Hypertension and Preeclampsia. Cells https://doi.org/10.3390/cells11081256

Anirban Chakraborty, Jayne E. Rattray, Sienna S. Drake, Stuart Matthews, Carmen Li, Bo Barker Jørgensen, Casey R. J. Hubert. 2022. Metabolic responses of thermophilic endospores to sudden heat-induced perturbation in marine sediment samples. Frontiers in Microbiology https://doi.org/10.3389/fmicb.2022.958417

Heather K Armstrong, Michael Bording-Jorgensen, Deanna M Santer, Zhengxiao Zhang, Rosica Valcheva, Aja M Rieger, Justin Sung-Ho Kim, Stephanie I Dijk, Ramsha Mahmood, Olamide Ogungbola, Juan Jovel, France Moreau, Hayley Gorman, Robyn Dickner, Jeremy Jerasi, Inderdeep K Mander, Dawson Lafleur, Christopher Cheng, Alexandra Petrova, Terri-Lyn Jeanson, Andrew Mason, Consolato M Sergi, Arie Levine, Kris Chadee, David Armstrong, Sarah Rauscher, Charles N Bernstein, Matthew W Carroll, Hien Q Huynh, Jens Walter, Karen L Madsen, Levinus A Dieleman, Eytan Wine. 2022. Unfermented b-fructan Fibers Fuel Inflammation in Select Inflammatory Bowel Disease Patients. Gastroenterology https://doi.org/10.1053/j.gastro.2022.09.034

Stephanie L. Bishop*, Marija Drikic*, Soren Wacker*, Yuan Yao Chen, Anita L. Kozyrskyj, Ian A. Lewis. Moving beyond descriptive studies: harnessing metabolomics to elucidate the molecular mechanisms underpinning host-microbiome phenotypes. Mucosal Immunology (2022) 15(6): 1071–1084. https://doi.org/10.1038/s41385-022-00553-4

Mehdi Mohammadi*, Stephanie L. Bishop*, Raied Aburashed*, Saad Luqman*, Ryan A. Groves*, Dominique G. Bihan*, Thomas Rydzak* and Ian A. Lewis. Microbial Containment Device (MCD): a platform for comprehensive analysis of microbial metabolism without sample preparation. Frontiers in Microbiology 

Maitreyi Raman, Christopher Ma, Lorian M Taylor, Levinus A Dieleman, Georgios V Gkoutos, Jeff K Vallance, Kathy D McCoy, Ian Lewis, Humberto Jijon, Derek M McKay, David M Mutch, Herman W Barkema, Deanna Gibson, Marcus Rauch, Subrata Ghosh. 2022. Crohn's disease therapeutic dietary intervention (CD-TDI): Study protocol for a randomized controlled trial. BMJ Open Gastroenterology 9(1):e00841.

Maryam Mapar*, Thomas Rydzak*, Ryan A. Groves*, and Ian A. Lewis. Biomarker Enrichment Medium (BEM): A Defined Medium for Metabolomic Analysis of Microbial Pathogens. Frontiers in Microbiology (2022) https://doi.org/10.3389/fmicb.2022.957158,.

Adam Shute, Dominique G. Bihan*, Ian A. Lewis, and Yasmin Nasser. Metabolomics: the key to unravelling the role of the microbiome in visceral pain neurotransmission. Frontiers in Neuroscience, 16:917197 (2022).

Ryan A. Groves*, Maryam Mapar*, Raied Aburashed*, Luis F. Ponce*, Stephanie L. Bishop*, Thomas Rydzak*, Marija Drikic*, Dominique G. Bihan*, Hallgrimur Benediktsson, Fiona Clement, Daniel B. Gregson**, and Ian A. Lewis. Methods for quantifying the metabolic boundary fluxes of cell cultures in large cohorts by high resolution hydrophilic liquid chromatography mass spectrometry. Analytical Chemistry, 94(25): 8874–8882 (2022). 

Thomas Rydzak*, Ryan A. Groves*, Ruichuan Zhang, Rajnigandha Pushpker*, Maryam Mapar*, and Ian A. Lewis. Metabolic Preference Assay for Rapid Diagnosis of Bloodstream Infections. Nature Communications, 13: 2332 (2022).

Dominique G, Bihan*; Thomas Rydzak; Madeleine Wyss; Keir Pittman*; Kathy D McCoy; Ian A. Lewis. Method for absolute quantification of short chain fatty acids via reverse phase chromatography mass spectrometry. PLOS One, 17(4): e0267093 (2022).

Tania Wong Fok Lung, Daniel Charytonowicz, Kristin G. Beaumont, Shivang S. Shah, Shwetha H. Sridhar, Claire L.Gorrie, Andre Mu, Casey E. Hofstaedter, David Varisco,  Thomas H.McConville, Marija Drikic*, Brandon Fowler, Andreacarola Urso, Wei Shi, Dario Fucich, Medini K. Annavajhala, Ibrahim N. Khan, Irina Oussenko,  Nancy Francoeur, Melissa L. Smith, Brent R. Stockwell, Ian A. Lewis, Abderrahman Hachani, Swikrity Upadhyay Baskota, Anne-Catrin Uhlemann, Danielle Ahn, Robert K. Ernst, Benjamin P. Howden, Robert Sebra, Alice Prince. Klebsiella pneumoniae induces host metabolic stress that promotes tolerance to pulmonary infection. Cell Metab. 34(5) 761-774.e9 (2022).

Fernando A. Vicentini, Jake C. Szamosi, Laura Rossi, Lateece Griffin, Kristoff Nieves, Dominique Bihan*, Ian A. Lewis, Quentin J. Pittman, Mark G. Swain, Michael G. Surette, Simon A. Hirota, Keith A Sharkey. Colitis-associated microbiota drives changes in behaviour in male mice in the absence of inflammation. Brain Behav Immun. 102: 266-278 (2022).

Arthur Lau, Jennifer J. Rahn, Mona Chappellaz, Hyunjae Chung, Hallgrimur Benediktsson, Dominique Bihan*, Anne von Mässenhausen, Andreas Linkermann, Craig N. Jenne, Stephen M. Robbins, Donna L. Senger, Ian A. Lewis, Justin Chun, Daniel A. Muruve. Dipeptidase-1 governs renal inflammation during ischemia reperfusion injury. Science Advances. 8 (2022).

2021

Aubrey N. Michi, Bryan G. Yipp, Antoine Dufour, Fernando Lopes & David Proud. 2021. PGC-1α mediates a metabolic host defense response in human airway epithelium during rhinovirus infections. Nature Communications https://doi.org/10.1038/s41467-021-23925-z

Shute A, Callejas BE, Li S, Wang A, Jayme TS, Ohland C, Lewis IA, Layden BT, Buret AG, McKay DM. Cooperation between host immunity and the gut bacteria is essential for helminth-evoked suppression of colitis. Microbiome. 9(1): 186 (2021)

Greta Baggio, Ryan A. Groves*, Roberto Chignola, Elena Piacenza, Alessandro Presentato, Ian A. Lewis, Silvia Lampis, Giovanni Vallini, Raymond J. Turner. Untargeted metabolomics investigation on selenite reduction to elemental selenium by Bacillus mycoides SeITE01. Front. Microb. 16(12): 711000 (2021).

Anna Laura Voigt; Douglas Andrew Kondro; Diana Powell; Hanna Valli-Pulaski; Mark Ungrin; Jan-Bernd Stukenborg; Claudia Klein; Ian A. Lewis; Kyle E. Orwig; Ina Dobrinski. Metabolic Phenotype of Early Prepubertal Spermatogonia and its Transition during Maturation. FASEB Journal. 35: e21513. (2021) 

Henrik Almblad, Trevor E. Randall, Jacquelyn D. Rich, Fanny Liu, Katherine Leblanc, Ryan Grove*, Yuefei Lou, Nicolas Fournier, Julie Groizeleau, Elise Granton, Laura K. Jennings, Larissa A. Singletary, Weerayuth Kittichotirat, Geoffrey L. Winsor, Fiona S. L. Brinkman, Tara M. L. Winstone, Nathan M. Good, Roger E. Bumgarner, Michael F. Hynes, Boo Shan Tseng, Manu Singh, Maria Silvina Stietz, Ayush Kumar, Ann Karen Brassinga, Matthew R. Parsek, Ian A. Lewis, Justin MacCallum, Bryan G. Yipp and Joe J. Harrison. Bacterial cyclic diguanylate signaling networks sense temperature. Nature Communications. 12(1):1-14 (2021)

Kira L Tomlinson, Tania Wong Fok Lung, Felix Dach, Medini K Annavajhala, Stanislaw J Gabryszewski, Ryan A Groves*, Marija Drikic*, Nancy J Francoeur, Shwetha H Sridhar, Melissa L Smith, Sara Khanal, Clemente J Britto, Robert Sebra, Ian Lewis, Anne-Catrin Uhlemann, Barbara C Kahl, Alice S Prince, Sebastián A Riquelme. Staphylococcus aureus induces an itaconate-dominated immunometabolic response that drives biofilm formation. Nature communications. 12(1):1-13 (2021)

McCubbin, Kayley; Anholt, R. M.; de Jong, Ellen; Ida, Jennifer; Nobrega, Diego B.; Conly, John; Gotte, Matthias; McAllister, Tim A.; Orsel, Karin; Lewis, Ian; Jackson, Leland; Plastow, Graham; Wieden, Hans-Joachim; McCoy, Kathy; Leslie, Myles; Robinson, Joan; Hardcastle, Lorian; Hollis, Aidan; Ashbolt, Nick; Checkley, Sylvia L.; Tyrrell, Gregory; Buret, Andre; Rennert-May, Elissa; Goddard, Ellen; Otto, Simon ; Geransar, Rose; Barkema, Herman. Knowledge gaps in the understanding of antimicrobial resistance in Canada. Frontiers in Public Health. 20 (2021)

2020

Erik van Tilburg Bernardes, Veronika Kuchařová Pettersen, Mackenzie W. Gutierrez, Isabelle Laforest-Lapointe, Nicholas G. Jendzjowsky, Jean-Baptiste Cavin, Fernando A. Vicentini, Catherine M. Keenan, Hena R. Ramay, Jumana Samara, Wallace K. MacNaughton, Richard J. A. Wilson, Margaret M. Kelly, Kathy D. McCoy, Keith A. Sharkey, & Marie-Claire Arrieta. 2020. Intestinal fungi are causally implicated in microbiome assembly and immune development in mice. Nature Communications https://doi.org/10.1038/s41467-020-16431-1 

Nadia K Monych, Raymond J Turner. 2020. Multiple Compounds Secreted by Pseudomonas aeruginosa Increase the Tolerance of Staphylococcus aureus to the Antimicrobial Metals Copper and Silver. mSystems https://doi.org/10.1128/mSystems.00746-20 

Sebastián A Riquelme, Kalle Liimatta, Tania Wong Fok Lung, Blanche Fields, Danielle Ahn, David Chen, Carmen Lozano, Yolanda Sáenz, Anne-Catrin Uhlemann, Barbara C Kahl, Clemente J Britto, Emily DiMango, Alice Prince. 2020. Pseudomonas aeruginosa utilizes host-derived itaconate to redirect its metabolism to promote biofilm formation. Cell Metab https://doi.org/10.1016/j.cmet.2020.04.017 

Xiyang Dong, Jayne E Rattray, D Calvin Campbell, Jamie Webb, Anirban Chakraborty, Oyeboade Adebayo, Stuart Matthews, Carmen Li, Martin Fowler, Adam Macdonald, Ryan A Groves*, Ian A Lewis, Scott H Wang, Daisuke Mayumi, Chris Greening, Casey RJ Hubert. Thermogenic hydrocarbons sustain diverse subseafloor microbial communities in deep sea cold seep sediments. 2020. Nature Communications,11(1):1-14 (2020)

Lukas F. Mager, Regula Burkhard, Noah Cooke, Kirsty Brown, Ryan A. Groves*, Ian A. Lewis, Markus B. Geuking, Kathy D. McCoy. Microbiome-derived inosine modulates response to checkpoint inhibitor immunotherapy. Science, 369:6510, 1481-1489 (2020) PMID: 32792462

Nicolas Esquerre, Lilian Basso, Manon Defaye, Fernando A Vicentini, Nina Cluny, Dominique Bihan, Simon A Hirota, Alana Schick, Humberto B Jijon, Ian A Lewis, Markus B Geuking, Keith A Sharkey, Christophe Altier, Yasmin Nasser. Colitis-Induced Microbial Perturbation Promotes Postinflammatory Visceral Hypersensitivity. Cellular and Molecular Gastroenterology and Hepatology. 10, 2:225-244 (2020) PMID: 32289500

Lindsey S Marmont, Gregory B Whitfield, Roland Pfoh, Rohan J Williams, Trevor E Randall, Alexandra Ostaszewski, Erum Razvi, Ryan A Groves*, Howard Robinson, Mark Nitz, Matthew R Parsek, Ian A Lewis, John C Whitney, Joe J Harrison, P Lynne Howell. PelX is a UDP- N-acetylglucosamine C4-epimerase involved in Pel polysaccharide-dependent biofilm formation. Journal of Biological Chemistry. 295(34):11949-11962 (2020) PMID: 32601062

2019

Erin Faught and Mathilakath M. Vijayan. 2019. Loss of the glucocorticoid receptor in zebrafish improves muscle glucose availability and increases growth. Am J Physiol Endocrinol Metab. https://doi.org/10.1152/ajpendo.00045.2019 

Trinh-Don Nguyen, Moonhyuk Kwon, Soo-Un Kim, Conrad Fischer, Dae-Kyun Ro. 2019. Catalytic plasticity of germacrene A oxidase underlies sesquiterpene lactone diversification. Plant Physiology https://doi.org/10.1104/pp.19.00629 

Mohammad Mehdi Banoei, Isabella Iupe, Reza Dowlatabadi Bazaz, Michael Campos, Hans J. Vogel, Brent W. Winston & Mehdi Mirsaeidi. 2019. Metabolomic and metallomic profile differences between Veterans and Civilians with Pulmonary Sarcoidosis. Scientific reports https://doi.org/10.1038/s41598-019-56174-8

Sebastián A. Riquelme, Carmen Lozano, Ahmed M. Moustafa, Kalle Liimatta, Kira L. Tomlinson, Clemente Britto, Sara Khanal, Simren K. Gill, Apurva Narechania, Jose M. Azcona-Gutiérrez, Emily DiMango, Yolanda Saénz, Paul Planet, and Alice Prince. 2019. CFTR-PTEN–dependent mitochondrial metabolic dysfunction promotes Pseudomonas aeruginosa airway infection. Sci. Transl. Med. https://doi.org/10.1126/scitranslmed.aav4634

Cynthia H Seow, Humberto Jijon, Ryan A Groves, Nastaran Sharifi, Gurmeet K Bindra, Remo Panaccione, Mark G Swain, Paul L Beck, Ian Lewis, Kathy McCoy. 2019. Urine metabolomic signatures differentiate pregnancy from the non-pregnant state and differ in pregnant patients with Crohn's disease compared with ulcerative colitis. Gastroenterology 156(6):S-891.

T Allain, R Groves, I Lewis, A Buret. 2019. Giardia sp. Metabolome: Towards the identification of new virulence factors. Journal of the Canadian Association of Gastroenterology 2:323-323.

Michael R. Taylor, Kyle L. Flannigan, Hannah Rahim, Amina Mohamud, Ian A. Lewis, Simon A. Hirota, Steven C. Greenway. Vancomycin Relieves Mycophenolate Mofetil-Induced Gastrointestinal Toxicity by Eliminating Gut Bacterial β-Glucuronidase Activity. Science Advances, 5(8) (2019) PMID: 31457102

Xiyang Dong, Chris Greening, Jayne Rattray, Anirban Chakraborty, Maria Chuvochina, Daisuke Mayumi, Jan Dolfing, Carmen Li, James Brooks, Bernie Bernard, Ryan Groves*, Ian Lewis, and Casey Hubert. Metabolic potential of uncultured bacteria and archaea associated with petroleum seepage in deep-sea sediments. Nature Communications, 10(1):1816 (2019) PMID: 31000700

2018

Ruth Moges, Dimitri Desmonts De Lamache, Saman Sajedy, Bernard S. Renaux, Morley D. Hollenberg, Gregory Muench, Elizabeth M. Abbott, and Andre G. Buret. 2018. Anti-inflammatory benefits of antibiotics: Tylvalosin induces apoptosis of porcine neutrophils and macrophages, promotes Efferocytosis, and inhibits Pro-Inflammatory CXCL-8, IL1α, and LTB4 Production, While Inducing the Release of Pro-Resolving Lipoxin A4 and Resolvin D1. Front. Vet. Sci. https://doi.org/10.3389/fvets.2018.00057 

Patrick T. Gauthier, Anita Evenset, Guttorm N. Christensen, Even H. Jorgensen, and Mathilakath M. Vijayan. 2018. Lifelong exposure to PCBs in the remote Norwegian Arctic disrupts the plasma stress metabolome in arctic charr. Environ. Sci. Technol. https://doi.org/10.1021/acs.est.7b05272